Thanks leejor. I agree, the only way the device settings "should" change would be thru a re-provisioning file from 3cx that has to be manually installed and such isn't the case. Only me and one other person has the knowledge on how to do this, plus it is happening at 3 separate sites.
Also, and I'm not sure if the 3CX developers realize this, but after creating/setting a new Welltech gateway under FXS/DECT, and associating the port to ext. relationship under the Extensions tab, after importing the .cfg file to the Welltech you have to manually change the Fax Relay value to T.38. Which goes back to what you are saying, if someone imports this file it reset that port back to a standard phone port.
I did notice this, after rebooting the device the Fax Relax goes back to default of Disabled. And, I logged back into our devices out in PA and sure enough the Fax Relay ports were back to Disabled and I just set those to T.38 yesterday, almost as if something overnight recycles. Did those devices reboot overnight, NO, and they did not lose power as they are plugged into a UPS unit with battery backup which is monitored by Solarwinds. If there was a power issue we would see the alert. I ran a few faxes to thru the devices and the settings are still T38.